Whole genome seq of Eschericia coli: urinary tract - upec-91 - SRA

SRX560607: Whole genome seq of Eschericia coli: urinary tract - upec-91
1 ILLUMINA (Illumina HiSeq 2000) run: 1.5M spots, 244.5M bases, 186.5Mb downloads

Design: DNA was extracted using Wizard Genomic DNA Purification Kit (Promega). Shotgun sequencing libraries were prepared using the Nextera system (Epicentre BioTechnologies), PCR amplified using FailSafe E PCR mix (Epicentre), monitored by real-time PCR, and removed when exponential growth of product was first observed. Libraries were purified using Agencourt AMPure XP (Beckman Coulter).

Submitted by: University of Washington

Study: Escherichia coli Genome sequencing and assembly

PRJNA248737 • SRP042632 • All experiments • All runs

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Whole genome sequencing of extraintestinal pathogenic clinical E. coli strains

Sample:

SAMN02802187 • SRS624903 • All experiments • All runs

Organism: Escherichia coli

Library:

Name: upec-91

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 1.5M spots, 244.5M bases, 186.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1314590	1,479,821	244.5M	186.5Mb	2014-10-26

ID:: 800611

SRA

Sequence Read Archive

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